* fabien/bin/dicom2dump.cc: Minor fix.
	* fabien/igr/dumps/souris18_us_01.dump: Correct dump.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3486 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* fabien/bin/dicom2dump.cc: Update.
	* fabien/igr/dumps/souris18_us_01.dump: New example file.
	* fabien/igr/seg_vol_irm.hh: Update.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3485 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/morpho/approx: New directory.
	* mln/morpho/approx/dilation.hh: New.
	* mln/morpho/approx/erosion.hh: New.
	* mln/morpho/approx/all.hh: New.
	* mln/morpho/closing/approx: New directory.
	* mln/morpho/closing/approx/all.hh: New.
	* mln/morpho/closing/approx/structural.hh: New.
	* mln/morpho/opening/approx: New directory.
	* mln/morpho/opening/approx/structural.hh: New.
	* mln/morpho/opening/approx/all.hh: New.
	* mln/morpho/all.hh: Update.
	* tests/morpho/approx: New directory.
	* tests/morpho/approx/erosion.cc: New.
	* tests/morpho/approx/dilation.cc: New.
	* tests/morpho/approx/Makefile.am: New.
	* tests/morpho/closing/approx: New directory.
	* tests/morpho/closing/approx/structural.cc: New.
	* tests/morpho/closing/approx/Makefile.am: New.
	* tests/morpho/closing/Makefile.am: Update.
	* tests/morpho/opening/approx: New directory.
	* tests/morpho/opening/approx/structural.cc: New.
	* tests/morpho/opening/approx/Makefile.am: New.
	* tests/morpho/opening/Makefile.am: Update.
	* tests/morpho/Makefile.am: Update.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3484 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* theo/dmap.txt: New.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3483 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* fabien/TODO: Simple TODO reminder.
	* fabien/bin/Makefile: Makefile to compile dicom binaries.
	* fabien/bin/dicom2dump.cc: Binary to convert dicom to dump.
	* fabien/bin/dicom_mask.cc: Binary to extract simple mask
	  from dicom images.
	* fabien/igr/Makefile: Update.
	* fabien/igr/launch2d.sh: Update.
	* fabien/igr/launch3d.sh: Update.
	* fabien/igr/seg2d.cc: Update.
	* fabien/igr/seg3d.cc: Update.
	* fabien/igr/seg_vol_irm.hh: Implement different threshold
	  techniques: double and deviation.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3482 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/core/concept/weighted_window.hh
	(mln_is_simple_weighted_window): New.
	* sandbox/folio/distance_front_new.hh: Copy to and rename as...
	* mln/canvas/distance_front.hh: ...this.
	Update doc.
	(distance_front_dispatch): Fix missing test.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3481 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* folio/distance_front.cc (main): Remove echo.
	Test equality between generic and fastest results.
	* folio/distance_front_new.hh
	(distance_front_fastest): Fix erroneous line moves.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3480 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* folio/distance_front.cc: New.
	* folio/distance_front_new.hh: Make it compile.
	Fix missing work.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3479 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/canvas/morpho/attribute_filter.hh: add a missing inline.

	* mln/registration/icp.hh: fix compilation issues.

	* tests/registration/registration.cc: enlarge the closest_point image
	bbox.

	* tests/transform/bench_closest_point_geodesic.cc: Update call to
	distance_and_closest_point_geodesic.

	* tests/transform/distance_and_closest_point_geodesic.cc: fix
	reference resut.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3478 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* edwin/tree/propagate.hh,
	* edwin/tree/tree.cc: Fix bugs and add check function.
	* edwin/tree/routines.hh: Some utils about tree manipulation.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3477 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* delmon/growcut/Makefile: New.
	* delmon/growcut/README: New.
	* delmon/growcut/check.sh: New.
	* delmon/growcut/keep_color.cc: New.
	* delmon/growcut/main.cc: New.
	* delmon/growcut/main_bw.cc: New.
	* delmon/growcut/remove_if_blue.cc: New.
	* delmon/growcut: New.
	* delmon/minsurf/Makefile: New.
	* delmon/minsurf/README: New.
	* delmon/minsurf/check.sh: New.
	* delmon/minsurf/keep_object.cc: New.
	* delmon/minsurf/main.cc: New.
	* delmon/minsurf: New.
	* delmon: New.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3476 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* sandbox/folio/distance_front_new.hh: New fast front propagation
	(not tested).

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3475 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* lazzara/igr/irm/irm_seg_with_mm_and_rag.cc: rename as...
	* lazzara/igr/irm/grad_clo: ... this.

	* lazzara/igr/irm/wst_rag.cc,
	* lazzara/igr/registration_3d.cc: make it compile.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3474 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/canvas/morpho/attribute_filter.hh: move MLN_INCLUDE_ONLY guards.

	* mln/registration/icp.hh: add missing to_vec(). Fix use of the new
	closest_point_functor.

	* mln/transform/internal/closest_point_functor.hh: fix a wrong index
	propagation.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3473 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/accu/stat/deviation.hh: New accumulator for standard
	  deviation.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3472 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* fabien/TODO: New.
	* fabien/igr/dump2pbm.cc: Move this...
	* fabien/bin/dump2pbm.cc: ...here.
	* fabien/igr/dump2ppm.cc: Move this...
	* fabien/bin/dump2ppm.cc: ...here.
	* fabien/igr/Makefile: Update.
	* fabien/igr/launch.sh: New tool.
	* fabien/igr/launch2d.sh: New tool.
	* fabien/igr/launch3d.sh: New tool.
	* fabien/igr/seg2d.cc: New tool.
	* fabien/igr/seg3d.cc: New tool.
	* fabien/igr/seg_vol_irm.cc: Rename this...
	* fabien/igr/seg_vol_irm.hh: ...into this.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3471 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/level/approx/median.hh: call diameter() instead of length() on
	win::ball.

	* mln/level/convert.hh: fix a return type.

	* mln/morpho/closing/essential.hh,
	* mln/morpho/essential.hh,
	* mln/morpho/opening/essential.hh: Fix includes.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3470 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/morpho/closing/area.hh: update copyright.

	* mln/morpho/closing/leveling.hh: fix guard and revamp.

	* mln/morpho/rank_filter.hh: update forward declaration.

	* tests/morpho/Makefile.am: run tests in morpho/closing and
	morpho/opening.

	* tests/morpho/closing/area.cc,
	* tests/morpho/closing/height.cc,
	* tests/morpho/closing/sum.cc,
	* tests/morpho/closing/volume.cc,
	* tests/morpho/opening/area.cc,
	* tests/morpho/opening/height.cc,
	* tests/morpho/opening/sum.cc,
	* tests/morpho/opening/volume.cc: use tiny.ppm instead of lena.ppm, it
	is faster.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3469 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/level/convert.hh: Add a specialization while the conversion
	value type is equal to the image value type.

	* tests/level/convert.cc: add a new test.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3468 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/transform/closest_point_geodesic.hh: rename as...
	* mln/transform/distance_and_closest_point_geodesic.hh: ... this.
	  Now returns both dmap and closest point images.
	  Add a version returning a closest point image containing indexes.

	* mln/transform/all.hh: update includes.

	* mln/transform/internal/closest_point_functor.hh: add a new functor
	which build a closest point image containing sites.

	* tests/Makefile.am: run transform tests.

	* tests/transform/Makefile.am: update test names
	.
	* tests/transform/bench_closest_point_geodesic.cc: fix missing
	include.

	* tests/transform/closest_point_geodesic.cc: rename as...
	* tests/transform/distance_and_closest_point_geodesic.cc: ... this.
	  Update according modifications in
	  distance_and_closest_point_geodesic.hh.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3467 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/util/couple.hh: New. behaves like a std::pair.

	* mln/util/all.hh,
	* mln/util/essential.hh: include new header.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3466 4aad255d-cdde-0310-9447-f3009e2ae8c0

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3465 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* tests/morpho/top_hat.cc: New.
	* tests/morpho/Makefile.am: Update.
	* tests/morpho/closing/area.cc,
	* tests/morpho/closing/height.cc (Copyright): Fix.
	* tests/morpho/closing/structural.cc: New.
	* tests/morpho/closing/Makefile.am: Update.
	* tests/morpho/opening/volume.cc,
	* tests/morpho/opening/area.cc,
	* tests/morpho/opening/height.cc (Copyright): Fix.
	* tests/morpho/opening/structural.cc: New.
	* tests/morpho/opening/Makefile.am: Update.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3464 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* nivault/extract_score.cc,
	* garrigues/factures/extract_array_highlight.cc,
	* inim/nature/closing.cc,
	* inim/nature/nature.cc,
	* inim/nature/opening.cc,
	* inim/nature/hom.cc,
	* theo/exec/closing_isotropic.cc
	(closing, opening): Update to...
	(closing::structural, opening::structural): ...this.

	* dalila/dematOld.hh,
	* dalila/demat.hh: Remove; they are just copies of...
	* scribo/demat.hh: ...this!


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3463 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/morpho/closing.hh: Move and rename as...
	* mln/morpho/closing/structural.hh: ...this.
	(closing): Rename as...
	(closing::structural): ...this.
	Layout.
	* mln/morpho/closing/all.hh: Update.

	* mln/morpho/opening.hh: Move and rename as...
	* mln/morpho/opening/structural.hh: ...this.
	(opening): Rename as...
	(opening::structural): ...this.
	Layout.
	* mln/morpho/opening/all.hh: Update.
	* mln/morpho/all.hh: Update.
	
	* mln/morpho/elementary/closing.hh,
	* mln/morpho/elementary/opening.hh: Layout.

	* mln/morpho/elementary/top_hat.hh: Update doc style.
	Layout.
	(top_hat_white, top_hat_black, top_hat_self_complementary):
	Make calls to elementary closing (resp. opening) explicit.
	* mln/morpho/top_hat.hh: Update doc style.
	(top_hat_white, top_hat_black, top_hat_self_complementary):
	Make calls to structural closing (resp. opening) explicit.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3462 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/win/ball.hh (print_): Print dimension.
	* tests/win/ball.cc: Inactivate echo.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3461 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* fabien/igr/seg_vol_irm.cc,
	* theo/exec/closing_isotropic.cc: Update.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3460 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/win/ball.hh: New.
	(diameter): New method; replace both...
	(disk2d::length): ...this and...
	(ball3d::length): ...this.
	
	* mln/win/ball3d.hh: Rename as...
	* mln/win/sphere3d.hh: ...this.
	(ball3d): Remove; replace by...
	(sphere3d): ...this new typedef.
	* mln/win/disk2d.hh (disk2d): Remove; replace by...
	(disk2d): ...this new typedef.
	* mln/win/all.hh (Copyright): Fix.
	(include): Update.

	* tests/win/ball.cc: New.
	* tests/win/sphere3d.cc: New.
	* tests/win/disk2d.cc: Remove echo.
	* tests/win/Makefile.am: Update.


git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3459 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* fabien/igr/Makefile: Update.
	* fabien/igr/seg_vol_irm.cc: Update.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3458 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/core/alias/window3d.hh: add slice coordinate..

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3457 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/core/alias/neighb3d.hh: add c8_3d.

	* mln/core/alias/window2d.hh: add win_c8p.

	* mln/core/alias/window3d.hh: add win_c4p_3d and win_c8p_3d.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3456 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/geom/bbox.hh,
	* mln/geom/max_col.hh,
	* mln/geom/max_ind.hh,
	* mln/geom/max_row.hh,
	* mln/geom/max_sli.hh,
	* mln/geom/min_col.hh,
	* mln/geom/min_ind.hh,
	* mln/geom/min_row.hh,
	* mln/geom/min_sli.hh,
	* mln/geom/ncols.hh,
	* mln/geom/ninds.hh,
	* mln/geom/nrows.hh,
	* mln/geom/nslis.hh: add missing traces.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3455 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* sandbox/scribo/Makefile: add new rules.

	* sandbox/scribo/demat.hh: add more documentation.

	* sandbox/scribo/demat31Oct2008.hh,
	* sandbox/scribo/demat_v2.hh: remove.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3454 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* headers.mk: update dist headers.

	* mln/canvas/morpho/all.hh: remove non existing included headers.

	* mln/morpho/tree/compute_attribute_image.hh,
	* mln/canvas/morpho/attribute_filter.hh: add missing include.

	* tests/core/image/plain.cc
	* mln/level/compare.hh,
	* mln/core/pixter2d.hh: add more preconditions.

	* mln/io/dicom/load.hh: update doc.

	* mln/morpho/essential.hh,
	* mln/morpho/all.hh,
	* mln/morpho/closing/algebraic.hh: revamp.

	* mln/morpho/closing/all.hh,
	* mln/morpho/closing/essential.hh,
	* mln/morpho/opening/all.hh,
	* mln/morpho/opening/essential.hh: new files.

	* tests/unit_test/unit-tests.mk: update test list.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3453 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* rush/exo3/Makefile: Added assignable target.
	* rush/exo3/assignable.cc: New.
	* rush/exo3/assignable.cc: New.
	* rush/exo3/exo3_1.cc: Renamed to...
	* rush/exo3/exo3_fun_area.cc: New.
	* rush/exo3/exo3_2.cc: Renamed to...
	* rush/exo3/exo3_fun_generator.cc: New.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3452 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/morpho/attribute/count_adjacent_vertices.hh,
	* mln/morpho/closing/area_on_vertices.hh,
	* mln/morpho/opening/area_on_vertices.hh:
	  Make area_on_vertices work with new algebraic code, and
	adapt count_adjacent_vertices accumulator as a morpho attribute.

	* mln/morpho/closing_area_on_vertices.hh,
	* mln/morpho/closing_attribute.hh,
	* mln/morpho/opening_area_on_vertices.hh,
	* mln/morpho/opening_attribute.hh:
	  Delete old implementations.

	* tests/morpho/artificial_line_graph_image_wst.cc,
	* tests/morpho/lena_line_graph_image_wst2.cc:
	  Update test files using area_on_vertices.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3451 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* sandbox/theo/rush/exo2/Makefile
	* sandbox/theo/rush/exo2/exo2.cc
	* sandbox/theo/rush/exo2/exo2.sh: Shell script for exo2.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3450 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* inverse.cc: Remove. Test file.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3449 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* milena/mln/canvas/morpho/attribute_filter.hh: Add one missing include.
	* milena/sandbox/theo/rush/exo3/Makefile: New.
	* milena/sandbox/theo/rush/exo3/exo3_1.cc: New.
	* milena/sandbox/theo/rush/exo3/exo3_2.cc: New.
	* milena/sandbox/theo/rush/exo3/inverse.cc: New.
	* milena/sandbox/theo/rush/exo3: New.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3448 4aad255d-cdde-0310-9447-f3009e2ae8c0

	* mln/canvas/morpho/algebraic_filter.hh,
	* mln/canvas/morpho/algebraic_union_find.hh: Remove.
	Now, use either mln::canvas::morpho::attribute_filter or
	leveling/algebraic filters in mln::morpho.

	* sandbox/edwin/accu.cc,
	* sandbox/edwin/accu_trait.hh,
	* sandbox/edwin/algebraic.hh,
	* sandbox/edwin/algebraic_union_find.hh,
	* sandbox/edwin/card.hh,
	* sandbox/edwin/filtres/connectes/Makefile,
	* sandbox/edwin/filtres/connectes/connected_filter.hh,
	* sandbox/edwin/filtres/connectes/filter.cc,
	* sandbox/edwin/filtres/connectes,
	* sandbox/edwin/filtres,
	* sandbox/edwin/leveling.hh: Remove all files related to
	  filters from my sandbox.

git-svn-id: https://svn.lrde.epita.fr/svn/oln/trunk@3447 4aad255d-cdde-0310-9447-f3009e2ae8c0